miRBase entry: osa-MIR6256

Stem-loop osa-MIR6256


Accession
MI0021606
Description
Oryza sativa osa-MIR6256 precursor miRNA


Sequence

7 reads, 10 reads per million, 2 experiments
gucuaccggaacuacaccuacgacgaguacuacaagaaguucuggagcagaaaccucgaccaagaacacugcuuggagcucuucagaacaacaccuacagacacaucuugaauucuugaucuagucgagaacugguuuGUAGUACUCGGUUGUAGGUGUAggugguguuu
...(((((...(((((((((((((((((((((((((..(((((((((.((.........(((((.......)))))..)))))))))))........(((............((((((((...))))))))))).)))))))))))).))))))))))))).)))))...

Structure
guc     gaa             -            --------------------------------------------aa         c  aaaccucga     aa 
   uaccg   cuacaccuacgac gaguacuacaag                                              guucuggag ag         ccaag  c
   |||||   ||||||||||||| ||||||||||||                                              ||||||||| ||         |||||  a
   guggu   gAUGUGGAUGUUG CUCAUGAUGuuu                                              caagacuuc uc         gguuc  c
uuu     --g             G            ggucaagagcugaucuaguucuuaaguucuacacagacauccacaa         -  -------ga     gu 


Annotation confidence Not enough data
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Genome context
Chr3: 1235626-1235795 [-]

Database links

Mature osa-miR6256

Accession MIMAT0024879
Description Oryza sativa osa-miR6256 mature miRNA
Sequence 139 - GUAGUACUCGGUUGUAGGUGUA - 160
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22585409
    Novel miRNAs in the control of arsenite levels in rice
    "Liu Q"
    "Funct Integr Genomics (2012) 12:649-658