miRBase entry: gma-MIR164f

Stem-loop gma-MIR164f


Accession
MI0021684
Description
Glycine max gma-MIR164f precursor miRNA
Gene family
MIPF0000045; MIR164

Literature search
17 open access papers mention gma-MIR164f
(37 sentences)

Sequence

aggucuugcUGGAGAAGCAGGGCACGUGCAacuucccucucacucagagacucuaugcuuguucaagcugauuuugcacgugcucuccuuuuccagcuugauu
.((((..((((((((((.(((((((((((((..((..((((.....))))......((((....)))).))..))))))))))))).))))))))))..))))

Structure
a    uu          C             cu  -----------------cc    a 
 gguc  gcUGGAGAAG AGGGCACGUGCAa  uc                   ucuc c
 ||||  |||||||||| |||||||||||||  ||                   |||| u
 uuag  cgaccuuuuc ucucgugcacguu  ag                   agag c
-    uu          c             uu  ucgaacuuguucguaucuc    a 


Annotation confidence Not enough data
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Genome context
chr3: 43533079-43533181 [+]

Database links

Mature gma-miR164f

Accession MIMAT0024890
Description Glycine max gma-miR164f mature miRNA
Sequence 10 - UGGAGAAGCAGGGCACGUGCA - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22559273
    Genome organization and characteristics of soybean microRNAs
    Turner M, Yu O, Subramanian S
    BMC Genomics (2012) 13:169