miRBase entry: gma-MIR166o

Stem-loop gma-MIR166o


Accession
MI0021691
Description
Glycine max gma-MIR166o precursor miRNA
Gene family
MIPF0000004; MIR166

Literature search
36 open access papers mention gma-MIR166o
(211 sentences)

Sequence

auguugagaggaauguugucuggcucgaggucaugauauggagauauauaugaaaguguuucaguuaaauuccaggguauauaaauuaauggaaauuaauuuauacccuaaaugauucUCGGACCAGGCUUCAUUCCCCccagcc
..((((.(.((((((..((((((.((((((((((.....((((...((..(((((...)))))..))..))))((((((((..(((((((....)))))))))))))))..)))).)))))).))))))..)))))).).)))).

Structure
au    a a      uu      c      -    gauauggagauauauaugaaaguguuucaguuaaauucc        ua       g 
  guug g ggaaug  gucugg ucgagg ucau                                       aggguaua  aauuaau g
  |||| | ||||||  |||||| |||||| ||||                                       ||||||||  |||||||  
  cgac C CCUUAC  CGGACC GGCUcu agua                                       ucccauau  uuaauua a
-c    c C      UU      A      u    -------------------------------------aa        --       a 


Annotation confidence Not enough data
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Genome context
chr6: 13019417-13019561 [-]

Database links

Mature gma-miR166o

Accession MIMAT0024897
Description Glycine max gma-miR166o mature miRNA
Sequence 119 - UCGGACCAGGCUUCAUUCCCC - 139
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22559273
    Genome organization and characteristics of soybean microRNAs
    Turner M, Yu O, Subramanian S
    BMC Genomics (2012) 13:169