miRBase entry: gma-MIR166s

Stem-loop gma-MIR166s


Accession
MI0021695
Description
Glycine max gma-MIR166s precursor miRNA
Gene family
MIPF0000004; MIR166

Literature search
36 open access papers mention gma-MIR166s
(317 sentences)

Sequence

aaugaggguguggggaaugucgccuuggcucgagagaucuauaugauaugauguguccaugcauucacuaaucaucaguuugugaguguuuucUCGGACCAGGCUUCAUUCCCcucacucccuc
...(((((.((((((((((..((((.((.((((((((.......(((((...)))))...((((((((.(((.....))).)))))))))))))))).))))))..))))))))..)).)))))

Structure
aau     u  --        uc    u  c        ucuauaugauaugauguguccau        u   c 
   gaggg gu  ggggaaug  gccu gg ucgagaga                       gcauucac aau a
   ||||| ||  ||||||||  |||| || ||||||||                       |||||||| ||| u
   cuccc ca  cCCCUUAC  CGGA CC GGCUcuuu                       ugugagug uug c
---     u  cu        UU    -  A        -----------------------        u   a 


Annotation confidence Not enough data
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Genome context
chr7: 10246809-10246932 [+]

Database links

Mature gma-miR166s

Accession MIMAT0024901
Description Glycine max gma-miR166s mature miRNA
Sequence 94 - UCGGACCAGGCUUCAUUCCC - 113
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22559273
    Genome organization and characteristics of soybean microRNAs
    Turner M, Yu O, Subramanian S
    BMC Genomics (2012) 13:169