Stem-loop gma-MIR166u

Accession

MI0021697

Description

Glycine max gma-MIR166u precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

37 open access papers mention gma-MIR166u
(221 sentences)

Sequence

gagguugagaggaauguugucuggcucgaggucauggaggaggaggagaguacugagaugagugaaaguuuccaauggaaauuuacccucuuaacacaaaaaaaaauugauUCUCGGACCAGGCUUCAUUCcccacaccca
(.(((((.(.((((((..((((((.(((((((((((....((((((....((((......)))).((((((((...))))))))..))))))....)).........))).)))))).))))))..))))))))).)))).

Structure

- a   -  a a      uu      c      -   ---------  gagg      agaguacugagaugaguga        a 
 g ggu ug g ggaaug  gucugg ucgagg uca         ug    aggagg                   aaguuucc  
 | ||| || | ||||||  |||||| |||||| |||         ||    ||||||                   |||||||| a
 c cca ac c cCUUAC  CGGACC GGCUCU agu         ac    uucucc                   uuuaaagg  
a -   c  - -      UU      A      u   uaaaaaaaa  acaa      -----------------ca        u 

Annotation confidence Not enough data

Genome context

chr4: 33862799-33862939 [+]

Mature gma-miR166u

• Accession: MIMAT0024903
• Description: Glycine max gma-miR166u mature miRNA
• Sequence: 112 - UCUCGGACCAGGCUUCAUUC - 131
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169