miRBase entry: gma-MIR390d

Stem-loop gma-MIR390d


Accession
MI0021700
Description
Glycine max gma-MIR390d precursor miRNA
Gene family
MIPF0000101; MIR390

Literature search
19 open access papers mention gma-MIR390d
(69 sentences)

Sequence

gagaaucuguaAAGCUCAGGAGGGAUAGCACCaugauacugaugauguucauagcaguacaaacuuggcgcuaucuaucuugagcuucauggcuucu
.((((.((((.((((((((((.(((((((.(((((.(((((((((...))))..)))))))....))).))))))).)))))))))).)))).))))

Structure
g    u    a          G       A   ----  a     --    u 
 agaa cugu AAGCUCAGGA GGAUAGC CCa    ug uacug  auga  
 |||| |||| |||||||||| ||||||| |||    || |||||  |||| g
 ucuu ggua uucgaguucu ucuaucg ggu    ac augac  uacu  
-    c    c          a       c   ucaa  -     ga    u 


Annotation confidence Not enough data
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Genome context
chr2: 41878692-41878788 [+]

Database links

Mature gma-miR390d

Accession MIMAT0024906
Description Glycine max gma-miR390d mature miRNA
Sequence 12 - AAGCUCAGGAGGGAUAGCACC - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22559273
    Genome organization and characteristics of soybean microRNAs
    Turner M, Yu O, Subramanian S
    BMC Genomics (2012) 13:169