miRBase entry: gma-MIR390f

Stem-loop gma-MIR390f


Accession
MI0021702
Description
Glycine max gma-MIR390f precursor miRNA
Gene family
MIPF0000101; MIR390

Literature search
19 open access papers mention gma-MIR390f
(69 sentences)

Sequence

agaaucuguaAAGCUCAGGAGGGAUAGCGCCacaacacucaugauuuuauaucauaauauauuuggcgcuaucuauccugaguuucacggguucuucuuacgg
(((((((((.((((((((((.(((((((((((........(((((.....)))))........))))))))))).)))))))))).)))))))))........

Structure
--------         a          G           caacacuc     u 
        agaaucugu AAGCUCAGGA GGAUAGCGCCa        augau u
        ||||||||| |||||||||| |||||||||||        ||||| u
        ucuugggca uuugaguccu ucuaucgcggu        uacua a
ggcauucu         c          a           uuauauaa     u 


Annotation confidence Not enough data
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Genome context
chr11: 15535991-15536093 [-]

Database links

Mature gma-miR390f

Accession MIMAT0024908
Description Glycine max gma-miR390f mature miRNA
Sequence 11 - AAGCUCAGGAGGGAUAGCGCC - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22559273
    Genome organization and characteristics of soybean microRNAs
    Turner M, Yu O, Subramanian S
    BMC Genomics (2012) 13:169