Stem-loop gma-MIR393j

Accession

MI0021711

Description

Glycine max gma-MIR393j precursor miRNA

Gene family

MIPF0000083; MIR393

Literature search

22 open access papers mention gma-MIR393j
(50 sentences)

Sequence

uguggguggagagUUCCAAAGGGAUCGCAUUGAUCuaauucuuguagaugccugaacuugcaaucuugaaucuugcaugcaauuccuggauuuagguuugcuuuaagggguucaguuauuggaucaugcgaucccuuaggaacuuuccaucaau
....(((((((((((((.((((((((((((.((((((((..(((..(((.(((......((((.(((((((((..............))))))))).))))....))).))))))..)))))))))))))))))))).)))))))))))))...

Structure

ugug             A            U        uc   ua   g   gaacuu    u         ugcaug 
    gguggagagUUCC AAGGGAUCGCAU GAUCuaau  uug  gau ccu      gcaa cuugaaucu      c
    ||||||||||||| |||||||||||| ||||||||  |||  ||| |||      |||| |||||||||       
    cuaccuuucaagg uucccuagcgua cuagguua  gac  uug gga      cguu ggauuuagg      a
-uaa             a            -        uu   --   g   --auuu    u         uccuua 

Annotation confidence Not enough data

Genome context

chr16: 34388224-34388377 [+]

Mature gma-miR393j

• Accession: MIMAT0024917
• Description: Glycine max gma-miR393j mature miRNA
• Sequence: 14 - UUCCAAAGGGAUCGCAUUGAUC - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169