miRBase entry: hme-mir-11

Stem-loop hme-mir-11


Accession
MI0021729
Description
Heliconius melpomene hme-mir-11 precursor miRNA
Gene family
MIPF0000252; mir-11


Sequence

gcguccuggcuggcugcggucaccgcgucccguggcuaguacucgcgcugugacauguguugccagccaCAUCACAGUCAGAGUUCUAGCUauacggcgcgguucaucggcgguacuauagaaggggaac
...((((..((((((((.(..((((((((..((((((((.((((..(((((((..((((........)))))))))))..)))).))))))))..))))))))....).)))))....)))..))))...

Structure
gcg    gg   ----     g --uc        cc        u    gc       ca    uug 
   uccu  cug    gcugc g    accgcguc  guggcuag acuc  gcuguga  ugug   c
   ||||  |||    ||||| |    ||||||||  |||||||| ||||  |||||||  ||||    
   gggg  gau    uggcg c    uggcgcgg  uaUCGAUC UGAG  UGACACU  ACac   c
caa    aa   auca     g uacu        ca        U    AC       --    cga 


Annotation confidence Not enough data
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Genome context
HE672080: 326718-326847 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from hme-mir-11
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hme-miR-11

Accession MIMAT0024934
Description Heliconius melpomene hme-miR-11 mature miRNA
Sequence 70 - CAUCACAGUCAGAGUUCUAGCU - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22722851
    Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
    "The Heliconius Genome Consortium"
    "Nature (2012) 487:94-98