Stem-loop hme-mir-1b

Accession

MI0021740

Description

Heliconius melpomene hme-mir-1b precursor miRNA

Gene family

MIPF0000038; mir-1

Sequence

gcaggcauaaccgcgcagcuccauacuucuuuacauuccauaugauaucaaauacuaUGGGAAGUAAGGAAGCACGGAAcucgcgcuaggcuaugugucuuc
..(((((((.((((((((.(((...(((((((((.(((((((..((.....))..))))))).)))))))))...))).)).))))..))...)))))))..

Structure

gc       --a  --    -  c   aua         a       ug  a 
  aggcaua   cc  gcgc ag ucc   cuucuuuac uuccaua  au u
  |||||||   ||  |||| || |||   ||||||||| |||||||  || c
  ucugugu   gg  cgcg uc AGG   GAAGGAAUG AGGGUau  ua a
cu       auc  au    c  A   CAC         A       ca  a 

Annotation confidence Not enough data

Genome context

HE672073: 1166256-1166357 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from hme-mir-1b

Mature hme-miR-1b

• Accession: MIMAT0024945
• Description: Heliconius melpomene hme-miR-1b mature miRNA
• Sequence: 58 - UGGGAAGUAAGGAAGCACGGAA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22722851
   Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
   "The Heliconius Genome Consortium"
   "Nature (2012) 487:94-98