miRBase entry: hme-mir-210

Stem-loop hme-mir-210


Accession
MI0021742
Description
Heliconius melpomene hme-mir-210 precursor miRNA
Gene family
MIPF0000086; mir-210


Sequence

acguuguuuaugaaagguccgcaauagccgcugucacacgcacaagaguauauacuaaucUUGUGCAGUGGCCAGCAGCUGCuuuggacuucauuugccuucuuccagggcuuuggcgu
(((((....((((..((((((...((((.((((((((..((((((((...........)))))))).)))).)))).))))...))))))))))..(((((.....)))))...)))))

Structure
     ----------------guuu    aa      caa    c    -    ac        guau 
acguu                    auga  gguccg   uagc gcug ucac  gcacaaga    a
|||||                    ||||  ||||||   |||| |||| ||||  ||||||||    u
ugcgg                    uacu  ucaggu   GUCG CGAC GGUG  CGUGUUcu    a
     uuucgggaccuucuuccguu    --      uuC    A    C    -A        aauc 


Annotation confidence Not enough data
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Genome context
HE670563: 209719-209837 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from hme-mir-210
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hme-miR-210

Accession MIMAT0024947
Description Heliconius melpomene hme-miR-210 mature miRNA
Sequence 61 - UUGUGCAGUGGCCAGCAGCUGC - 82
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22722851
    Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
    "The Heliconius Genome Consortium"
    "Nature (2012) 487:94-98