miRBase entry: hme-mir-279b

Stem-loop hme-mir-279b


Accession
MI0021759
Description
Heliconius melpomene hme-mir-279b precursor miRNA
Gene family
MIPF0000184; mir-279


Sequence

cuugaagauaauuggaaaaauuuugcaaucaguuaauggguauaagucuagugucacagugugcauuugUGACUAGAUCUACACUCAUUGAuugcuugcaaacaaaucuucaag
(((((((((..(((.......(((((((.((((((((((((.((.(((((..(((((((.......)))))))))))).)).)))))))))))).)))))))))))))))))))

Structure
         aa   gaaaaau       u            a  a     gu       ug 
cuugaagau  uug       uuugcaa caguuaaugggu ua gucua  gucacag  u
|||||||||  |||       ||||||| |||||||||||| || |||||  |||||||  g
gaacuucua  aac       aaacguu guuAGUUACUCA AU UAGAU  CAGUguu  c
         --   -------       c            C  C     --       ua 


Annotation confidence Not enough data
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Genome context
HE670979: 5099-5212 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from hme-mir-279b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hme-miR-279b

Accession MIMAT0024964
Description Heliconius melpomene hme-miR-279b mature miRNA
Sequence 70 - UGACUAGAUCUACACUCAUUGA - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22722851
    Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
    "The Heliconius Genome Consortium"
    "Nature (2012) 487:94-98