miRBase entry: hme-mir-2a

Stem-loop hme-mir-2a

Accession

MI0021766

Description

Heliconius melpomene hme-mir-2a precursor miRNA

Gene family

MIPF0000049; mir-2

Sequence

gaugucugcacugaaugugguccugucaucaaagucgguuugucauagaucaccacguaacUAUCACAGCCAGCUUUGAUGAGCacgacugcauuugucacaccauauc
...((.((.((.((((((((((.((((((((((((.((((.((.((((............)))).)))))).)))))))))).)).)))))))))))))).))......

Structure

---gau  c  c  u          c  -          c    u  c    aucac 
      gu ug ac gaaugugguc ug ucaucaaagu gguu gu auag     c
      || || || |||||||||| || |||||||||| |||| || ||||      
      ca ac ug uuuacgucag aC AGUAGUUUCG CCGA CA UAUc     a
cuauac  c  -  -          c  G          A    -  C    aaugc

Annotation confidence Not enough data

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Genome context

HE671256: 344456-344564 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from hme-mir-2a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature hme-miR-2a

Accession	MIMAT0024971
Description	Heliconius melpomene hme-miR-2a mature miRNA
Sequence	62 - UAUCACAGCCAGCUUUGAUGAGC - 84
Evidence	experimental Illumina [1]

References

PubMed ID: 22722851
Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
"The Heliconius Genome Consortium"
"Nature (2012) 487:94-98