Stem-loop hme-mir-71

Accession

MI0021782

Description

Heliconius melpomene hme-mir-71 precursor miRNA

Gene family

MIPF0000278; mir-71

Sequence

gcucucugccucacgaaagacuuggguagugagauguccuggcacaucaaaauUCUCACUACCUUGUCUUUCAUGcggauagagc
...(((((((.((.(((((((..(((((((((((.....((......))....))))))))))).))))))).)).)).))))).

Structure

gcu     -  u  c       uu           ugucc  gc 
   cucug cc ca gaaagac  ggguagugaga     ug  a
   ||||| || || |||||||  |||||||||||     ||   
   gagau gg GU CUUUCUG  UCCAUCACUCU     ac  c
--c     a  c  A       -U           -uaaa  ua 

Annotation confidence Not enough data

Genome context

HE671256: 336011-336095 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from hme-mir-71

Mature hme-miR-71

• Accession: MIMAT0024985
• Description: Heliconius melpomene hme-miR-71 mature miRNA
• Sequence: 54 - UCUCACUACCUUGUCUUUCAUG - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22722851
   Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
   "The Heliconius Genome Consortium"
   "Nature (2012) 487:94-98