Stem-loop hme-mir-998

Accession

MI0021798

Description

Heliconius melpomene hme-mir-998 precursor miRNA

Gene family

MIPF0000952; mir-998

Sequence

ggggcaaagggccaguguggcacggggcguccccgagcuacaucccguggggcuccagucugugcgugUAGCACCAUGGGAUUCAGCUCAgggcggccgcgacuaacaucuacuaacaucaaacgaccuu
..(((.....))).((((....((.(((..(((.(((((..(((((((((.(((.((((....)).)).))).)))))))))..))))).)))..))).))....)))).....................

Structure

-------ggggcaaagggcca    ggca  g   gu   c     ac         g   c  -  c 
                     gugu    cg ggc  ccc gagcu  aucccgugg gcu ca gu u
                     ||||    || |||  ||| |||||  ||||||||| ||| || ||  
                     uaca    gc ccg  ggg CUCGA  UAGGGUACC CGA gu cg g
uuccagcaaacuacaaucauc    auca  g   gc   A     CU         A   U  g  u 

Annotation confidence Not enough data

Genome context

HE672080: 325219-325348 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from hme-mir-998

Mature hme-miR-998

• Accession: MIMAT0025001
• Description: Heliconius melpomene hme-miR-998 mature miRNA
• Sequence: 69 - UAGCACCAUGGGAUUCAGCUCA - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22722851
   Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
   "The Heliconius Genome Consortium"
   "Nature (2012) 487:94-98