Stem-loop hme-mir-9a

Accession

MI0021800

Description

Heliconius melpomene hme-mir-9a precursor miRNA

Gene family

MIPF0000014; mir-9

Sequence

ggcgcggcucgucucuuugguauccuagcuguaggcguguccucguacccUAAAGUUAUGGUACCGAAGUUAcgagccguaccgcgccuccaccgagcgcggccagucgcc
((((((((.((((((..(((............(((((((.................((((((..((......)).)))))).))))))))))..))).)))))).).))))

Structure

    - -   u   -   uu   uauccuagcugu       uccucguacccUAAAGU      AC  AA 
ggcg c ggc cgu cuc  ugg            aggcgug                 UAUGGU  CG  G
|||| | ||| ||| |||  |||            |||||||                 ||||||  ||   
ccgc g ccg gcg gag  acc            uccgcgc                 augccg  gc  U
    u a   -   c   cc   ------------       ----------------c      -a  AU 

Annotation confidence Not enough data

Genome context

HE669612: 10280-10390 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from hme-mir-9a

Mature hme-miR-9a

• Accession: MIMAT0025003
• Description: Heliconius melpomene hme-miR-9a mature miRNA
• Sequence: 51 - UAAAGUUAUGGUACCGAAGUUA - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22722851
   Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
   "The Heliconius Genome Consortium"
   "Nature (2012) 487:94-98