miRBase entry: hsv1-mir-H26

Stem-loop hsv1-mir-H26


Accession
MI0021816
Description
Herpes Simplex Virus 1 hsv1-mir-H26 precursor miRNA


Sequence

ucaggcuagcgcggcgggccugccguaguuucUGGCUCGGUGAGCGACGGUCcgguugcuugg
.(((((.(((.(((((.((.(((((.((((...))))))))).))..))..))))))))))).

Structure
u     u   g   --  -g  c     u    u 
 caggc agc cgg  cg  gc ugccg aguu  
 ||||| ||| |||  ||  || ||||| |||| c
 guucg uug gcC  GC  CG GUGGC UCGG  
g     -   -   UG  AG  A     -    U 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hsv1-miR-H26

Accession MIMAT0025022
Description Herpes Simplex Virus 1 hsv1-miR-H26 mature miRNA
Sequence 33 - UGGCUCGGUGAGCGACGGUC - 52
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22661375
    A novel miRNA produced during lytic HSV-1 infection is important for efficient replication in tissue culture
    "Munson DJ, Burch AD"
    "Arch Virol (2012) 157:1677-1688