miRBase entry: rno-mir-6327

Stem-loop rno-mir-6327


Accession
MI0021851
Description
Rattus norvegicus rno-mir-6327 precursor miRNA


Sequence

1 reads, 1 reads per million, 1 experiments
agaagacacagaggagccucggucacagcaugguagacugcgaugucuguagucccggcugggcaggaagucucCGGACUGUAGAUCCAUCUCccacagcuaggcugaggagucuguucugacuugugcucac
.((..((((((((.((((((((((..(((.(((.(((.((.((..((((((((((.((..((((.....))))))))))))))))))))))).)))..))).))))))))...)).)))))...)))..))..

Structure
-a  ag   ---     g  ---        ac   -a   u   c  c  ug          c  cu    a 
  ga  aca   cagag ag   ccucgguc  agc  ugg aga ug ga  ucuguagucc gg  gggc g
  ||  |||   ||||| ||   ||||||||  |||  ||| ||| || ||  |||||||||| ||  |||| g
  cu  ugu   gucuu uc   ggagucgg  ucg  acc UCU AC CU  AGAUGUCAGG Cc  ucug a
ca  cg   uca     g  uga        -a   ac   C   -  -  --          -  --    a 


Annotation confidence Not enough data
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Genome context
chr10: 68977601-68977733 [-]

Database links

Mature rno-miR-6327

Accession MIMAT0025066
Description Rattus norvegicus rno-miR-6327 mature miRNA
Sequence 75 - CGGACUGUAGAUCCAUCUC - 93
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22605339
    Limonoid compounds inhibit sphingomyelin biosynthesis by preventing CERT protein-dependent extraction of ceramides from the endoplasmic reticulum
    "Hullin-Matsuda F, Tomishige N, Sakai S, Ishitsuka R, Ishii K, Makino A, Greimel P, Abe M, Laviad EL, Lagarde M, Vidal H, Saito T, Osada H, Hanada K, Futerman AH, Kobayashi T"
    "J Biol Chem (2012) 287:24397-24411

  2. PubMed ID: 22908386
    MicroRNAs in the pineal gland: miR-483 regulates melatonin synthesis by targeting arylalkylamine N-acetyltransferase
    "Clokie SJ, Lau P, Kim HH, Coon SL, Klein DC"
    "J Biol Chem (2012) 287:25312-25324