miRBase entry: mmu-mir-6390

Stem-loop mmu-mir-6390


Accession
MI0021924
Symbol
MGI: Mir6390
Description
Mus musculus mmu-mir-6390 precursor miRNA


Sequence

16 reads, 1 reads per million, 7 experiments
cagguaguuggcuacagcaacaaggaugacgaacacagauGAAUUGAUCAGGAUGUAACCAuucaaaguugagagguuugaugcuucgaaaucuuuuccaucuuugauauuugccuuaguggcugccuc
.(((((((..((((..((((((((((((..(((...((((...((((..((.((..((((.((((....)))).))))..)).)))))).)))).)))))))))))....))))..)))).))))))).

Structure
c       ug    ca    ----        ac   cac    GAA    UC  G  GU    A    a 
 agguagu  gcua  gcaa    caaggaug  gaa   agau   UUGA  AG AU  AACC uuca a
 |||||||  ||||  ||||    ||||||||  |||   ||||   ||||  || ||  |||| ||||  
 uccgucg  ugau  cguu    guuucuac  cuu   ucua   agcu  uc ua  uugg gagu g
c       -g    uc    uaua        --   --u    --a    --  g  gu    a    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr14: 105623642-105623770 [-]

Database links

Mature mmu-miR-6390

Accession MIMAT0025139
Description Mus musculus mmu-miR-6390 mature miRNA
Sequence 41 - GAAUUGAUCAGGAUGUAACCA - 61
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 22319597
    Complexity of murine cardiomyocyte miRNA biogenesis, sequence variant expression and function
    Humphreys DT, Hynes CJ, Patel HR, Wei GH, Cannon L, Fatkin D, Suter CM, Clancy JL, Preiss T
    PLoS One (2012) 7:e30933