Accession
MI0022020
Description
Populus trichocarpa
ptc-MIR6445a precursor miRNA
Gene family
MIPF0001621;
MIR6445
Sequence
ucucuuugccacguugUUCAUUCCUCUUCCUAAAAUGGcuucuccuucaauuuuaaaaaaaauaaaaauuaaaggagaauccaauaugaaaugagaagcuauuuuaggaagggaaugaauacggugucgguguuauaagaga
((((((((.(((..((((((((((.(((((((((((((((((((.(((((((((....)))))..........(((...)))....))))..)))))))))))))))))))))))))))))..))).)).......))))))
((((((((.(((..((((((((((.(((((((((((((((((((.(((((((((....)))))..........(((...)))....))))..)))))))))))))))))))))))))))))..))).)).......))))))
Structure
------- c gu U -c ----------------------- a
ucucuu ug cac ugUUCAUUCC CUUCCUAAAAUGGcuucuc uuca auuuu a
|||||| || ||| |||||||||| ||||||||||||||||||| |||| |||||
agagaa gc gug auaaguaagg gaaggauuuuaucgaagag aagu uaaaa a
uauugug u gc - ua auaaccuaagaggaaauuaaaaa a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
CM000348.2: 7706152-7706293 [-]
Database links
Mature ptc-miR6445a
| Accession | MIMAT0025248 |
| Description | Populus trichocarpa ptc-miR6445a mature miRNA |
| Sequence | 17 - UUCAUUCCUCUUCCUAAAAUGG - 38 |
| Evidence |
experimental
miRNAseq [1], Illumina [2] |
References
|
