miRBase entry: hbr-MIR319

Stem-loop hbr-MIR319


Accession
MI0022056
Description
Hevea brasiliensis hbr-MIR319 precursor miRNA
Gene family
MIPF0000010; MIR159

Literature search
1 open access papers mention hbr-MIR319
(1 sentences)

Sequence

guuggaguaaugacugaugagcaguuaagagagcuuucuucaguccagucacggugggcaaugggauuuaauuagcugccgacucauucauccaaauacugaguuaaaggcuagcugagaaaguuacccaguaaaugagugaaugaugcgggagacaaauugaaucuuaugcuuccuguacUUGGACUGAAGGGAGCUCCCUuuacuguuauuuaauccaa
.(((((........(((..((((((.(((.(((((((((((((((((((.((((.(((((.((((((((((((.(((.(((..((((((((.((..(((((.......((.(((((.....))))))))))))..)).))))))))..))).)).).))))))))))))))))).)))))).))))))))))))))))).))).))))))..))).)))))

Structure
g     guaaugac   ug      u   a                 -  c    u     a            a -  g   ac        c  aa     aguuaaa  c     g 
 uugga        uga  agcagu aag gagcuuucuucagucca gu acgg gggca ugggauuuaauu g cu ccg  ucauucau ca  uacug       gg uagcu a
 |||||        |||  |||||| ||| ||||||||||||||||| || |||| ||||| |||||||||||| | || |||  |||||||| ||  |||||       || ||||| g
 aaccu        auu  uuguca uUC CUCGAGGGAAGUCAGGU ca uguc uucgu auucuaaguuaa c ga ggc  aguaagug gu  augac       cc auuga a
-     -------a   ua      u   C                 U  -    c     -            a a  g   gu        a  aa     -------  -     a 


Annotation confidence Not enough data
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Genome context
KB629150.1: 30162-30382 [+]

Database links

Mature hbr-miR319

Accession MIMAT0025286
Description Hevea brasiliensis hbr-miR319 mature miRNA
Sequence 182 - UUGGACUGAAGGGAGCUCCCU - 202
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22330773
    Identification of novel microRNAs in Hevea brasiliensis and computational prediction of their targets
    Gébelin V, Argout X, Engchuan W, Pitollat B, Duan C, Montoro P, Leclercq J
    BMC Plant Biol (2012) 12:18