miRBase entry: hbr-MIR408a

Stem-loop hbr-MIR408a


Accession
MI0022058
Description
Hevea brasiliensis hbr-MIR408a precursor miRNA
Gene family
MIPF0000102; MIR408

Literature search
1 open access papers mention hbr-MIR408a
(3 sentences)

Sequence

gguaaagaaagagacagacuAAGACUGGGAACAGGCAGAGCAuggauggagcuauuaacggaaauaucuguuuuggcuccacccaugcacugccucuucccuggcuuguggcucuucuuuuucugccc
(((..(((((((((.((((((((...(((((.((((((.((((((.((((((((..((((((....)))))).)))))))).)))))).)))))).)))))...))..))).))))))))))))))).

Structure
-   aa         c   -   --  ACU     C      A      a        uu      a 
 ggu  agaaagaga aga cuA  AG   GGGAA AGGCAG GCAugg uggagcua  aacgga a
 |||  ||||||||| ||| |||  ||   ||||| |||||| |||||| ||||||||  ||||||  
 ccg  ucuuuuucu ucu ggu  uc   cccuu uccguc cguacc accucggu  uugucu u
c   --         -   c   gu  ggu     c      a      c        -u      a 


Annotation confidence Not enough data
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Genome context
KB616898.1: 70551-70678 [-]

Database links

Mature hbr-miR408a

Accession MIMAT0025288
Description Hevea brasiliensis hbr-miR408a mature miRNA
Sequence 21 - AAGACUGGGAACAGGCAGAGCA - 42
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22330773
    Identification of novel microRNAs in Hevea brasiliensis and computational prediction of their targets
    Gébelin V, Argout X, Engchuan W, Pitollat B, Duan C, Montoro P, Leclercq J
    BMC Plant Biol (2012) 12:18