miRBase entry: pde-MIR482d

Stem-loop pde-MIR482d


Accession
MI0022100
Description
Pinus densata pde-MIR482d precursor miRNA
Gene family
MIPF0000403; MIR482

Literature search
1 open access papers mention pde-MIR482d
(3 sentences)

Sequence

gucauggggucuuuaggcuuuggaggauuuggaaaggcuuagucauucuuuuuaccgaggauauucgauuuucuaagaaCCUUUCCAACGCCUCCCAUGCCuauaguccucauuguacaugucacccgaucgcag
(((((((((.((.(((((...(((((..((((((((((((((((((((((......))))))....))....)))))..)))))))))..)))))...))))).)).))))).)).)).................

Structure
-----------------  -  -     u  u     uuu     au         --     ----  ----      uu 
                 gu ca ugggg cu uaggc   ggagg  uuggaaagg  cuuag    uc    auucuu  u
                 || || ||||| || |||||   |||||  |||||||||  |||||    ||    ||||||   
                 ca gu acucc ga auCCG   CCUCC  AACCUUUCC  gaauc    ag    uaggag  a
gacgcuagcccacugua  u  u     u  u     UAC     GC         aa     uuuu  cuua      cc 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature pde-miR482d

Accession MIMAT0025336
Description Pinus densata pde-miR482d mature miRNA
Sequence 80 - CCUUUCCAACGCCUCCCAUGCC - 101
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22480283
    Transcriptome-wide identification and characterization of miRNAs from Pinus densata
    Wan LC, Zhang H, Lu S, Zhang L, Qiu Z, Zhao Y, Zeng QY, Lin J
    BMC Genomics (2012) 13:132