Stem-loop pde-MIR949a

Accession

MI0022104

Description

Pinus densata pde-MIR949a precursor miRNA

Gene family

MIPF0001455; MIR949

Literature search

1 open access papers mention pde-MIR949a
(1 sentences)

Sequence

cagagcuUCUCUAGGAAUCAAAUGUGUCuuccucuugaacgccuuucacgcacaggaaggcccauuggauucccgggagaagcucucc
.(((((((((((.((((((.((((.(((((((((.((((.....)))).)...)))))))).)))).))))))..)))))))))))..

Structure

-c           -A      A    U        --- u    c 
  agagcuUCUCU  GGAAUC AAUG GUCuuccu   c ugaa g
  |||||||||||  |||||| |||| ||||||||   | |||| c
  ucucgaagagg  ccuuag uuac cggaagga   g acuu c
cc           gc      g    c        cac c    u 

Annotation confidence Not enough data

Genome context

Unknown

Mature pde-miR949a

• Accession: MIMAT0025340
• Description: Pinus densata pde-miR949a mature miRNA
• Sequence: 8 - UCUCUAGGAAUCAAAUGUGUC - 28
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22480283
   Transcriptome-wide identification and characterization of miRNAs from Pinus densata
   Wan LC, Zhang H, Lu S, Zhang L, Qiu Z, Zhao Y, Zeng QY, Lin J
   BMC Genomics (2012) 13:132