miRBase entry: pde-MIR951

Stem-loop pde-MIR951


Accession
MI0022107
Description
Pinus densata pde-MIR951 precursor miRNA

Literature search
1 open access papers mention pde-MIR951
(1 sentences)

Sequence

gaagcgauggUGUUCUUGACGUCUGGACCACguggguuugcuuuacguugggcaugaauaaacaaucaucuaccgcgguucagucaucaagaacaccuuugcuuucauuuacaug
(((((((.(((((((((((.(.(((((((.(((((((.(((((......))))).............))))).)).))))))).).))))))))))).)))))))..........

Structure
----------       u           C U       A  -     ------------u     ua 
          gaagcga ggUGUUCUUGA G CUGGACC Cg ugggu             ugcuu  c
          ||||||| ||||||||||| | ||||||| || |||||             |||||   
          uuucguu ccacaagaacu c gacuugg gc aucua             acggg  g
guacauuuac       u           a u       c  c     cuaacaaauaagu     uu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pde-miR951

Accession MIMAT0025343
Description Pinus densata pde-miR951 mature miRNA
Sequence 11 - UGUUCUUGACGUCUGGACCAC - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22480283
    Transcriptome-wide identification and characterization of miRNAs from Pinus densata
    Wan LC, Zhang H, Lu S, Zhang L, Qiu Z, Zhao Y, Zeng QY, Lin J
    BMC Genomics (2012) 13:132