miRBase entry: pde-MIR1311

Stem-loop pde-MIR1311


Accession
MI0022112
Description
Pinus densata pde-MIR1311 precursor miRNA

Literature search
1 open access papers mention pde-MIR1311
(4 sentences)

Sequence

guaggaacaggcggacuggcauaacuccgcccauauuuuacugucagagauggUCAGAGUUUUGCCAGUUCCGCCcauuccuacug
(((((((..((((((((((((.(((((.(.((((.((((......)))))))).).))))).)))))).))))))..)))))))..

Structure
--       ca      -      u     c c    a    ac 
  guaggaa  ggcgga cuggca aacuc g ccau uuuu  u
  |||||||  |||||| |||||| ||||| | |||| ||||   
  cauccuu  CCGCCU GACCGU UUGAG C ggua gaga  g
gu       ac      U      U     A U    -    cu 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature pde-miR1311

Accession MIMAT0025348
Description Pinus densata pde-miR1311 mature miRNA
Sequence 54 - UCAGAGUUUUGCCAGUUCCGCC - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22480283
    Transcriptome-wide identification and characterization of miRNAs from Pinus densata
    Wan LC, Zhang H, Lu S, Zhang L, Qiu Z, Zhao Y, Zeng QY, Lin J
    BMC Genomics (2012) 13:132