Stem-loop pde-MIR1312

Accession

MI0022113

Description

Pinus densata pde-MIR1312 precursor miRNA

Gene family

MIPF0001466; MIR1312

Literature search

1 open access papers mention pde-MIR1312
(1 sentences)

Sequence

ucccccaaaacauccauaucgcuauaucucuccuaauuagguugaaucgaaacagccaacacuuucaguugauucaaauauuaguuuguuucugcauaaUUUGGAGAGAAAAUGGCGACAUagauguuuucggcgau
((.((.((((((((.((.(((((((.(((((((.((((((((((........)))))..........((.((..(((((....)))))..)).)).))))).)))))))..))))))).)).)))))))).)).)).

Structure

-  c  c        c  a       -a       u     gguugaaucgaaacagccaacacuuuca  u  uu     a 
 uc cc aaaacauc au ucgcuau  ucucucc aauua                            gu ga  caaau u
 || || |||||||| || |||||||  ||||||| |||||                            || ||  |||||  
 ag gg uuuuguag UA AGCGGUA  AGAGAGG UUaau                            cg cu  guuug u
u  c  c        a  C       AA       U     ---------------------------a  u  uu     a 

Annotation confidence Not enough data

Genome context

Unknown

Mature pde-miR1312

• Accession: MIMAT0025349
• Description: Pinus densata pde-miR1312 mature miRNA
• Sequence: 100 - UUUGGAGAGAAAAUGGCGACAU - 121
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22480283
   Transcriptome-wide identification and characterization of miRNAs from Pinus densata
   Wan LC, Zhang H, Lu S, Zhang L, Qiu Z, Zhao Y, Zeng QY, Lin J
   BMC Genomics (2012) 13:132