miRBase entry: pde-MIR3704a

Stem-loop pde-MIR3704a


Accession
MI0022117
Description
Pinus densata pde-MIR3704a precursor miRNA
Gene family
MIPF0001425; MIR3704

Literature search
1 open access papers mention pde-MIR3704a
(7 sentences)

Sequence

aaggucaugGGUCUCGGUGGAGUUGGGAAGAcuguuacagugcauagaugucaucagaucauaaauuacugcguagguauuuccaacccacagagaccugauggccuu
(((((((((((((((.((((.((((((((.(((....(((((.((..(((((....)).)))..)))))))....))).)))))))))))).))))))).))))))))

Structure
        -       G    A        G   guua     c  ag   -  a 
aaggucau gGGUCUC GUGG GUUGGGAA Acu    cagug au  aug uc u
|||||||| ||||||| |||| |||||||| |||    ||||| ||  ||| ||  
uuccggua uccagag cacc caaccuuu ugg    gucau ua  uac ag c
        g       a    -        a   augc     -  aa   u  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pde-miR3704a

Accession MIMAT0025353
Description Pinus densata pde-miR3704a mature miRNA
Sequence 10 - GGUCUCGGUGGAGUUGGGAAGA - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22480283
    Transcriptome-wide identification and characterization of miRNAs from Pinus densata
    Wan LC, Zhang H, Lu S, Zhang L, Qiu Z, Zhao Y, Zeng QY, Lin J
    BMC Genomics (2012) 13:132