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miRBase |
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Stem-loop sequence ssc-let-7f-2 |
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Accession | MI0022121 (change log) | |||||||
Description | Sus scrofa let-7f-2 stem-loop | |||||||
Gene family | MIPF0000002; let-7 | |||||||
Literature search |
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46 open access papers mention ssc-let-7f-2 | |||||||
Stem-loop |
--- a a ug --------- u 5' ucu ucag g agguaguagauuguauaguugu gggguag g ||| |||| | |||||||||||||||||||||| ||||||| a 3' agg aguc c uccguuaucuaacauaucaaua ucccauu u aug - - cu gaggacuug u |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence ssc-let-7f-5p |
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Accession | MIMAT0002152 |
Sequence |
11 - ugagguaguagauuguauaguu - 32 |
Deep sequencing | 153350 reads, 15 experiments |
Evidence | experimental; Illumina [1-2] |
Mature sequence ssc-let-7f-3p |
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Accession | MIMAT0037464 |
Sequence |
67 - cuauacaaucuauugccuucc - 87 |
Deep sequencing | 39 reads, 9 experiments |
Evidence | experimental; Illumina [3] |
References |
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1 |
PMID:21312241
"MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing"
J Cell Biochem. 112:1318-1328(2011).
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2 |
PMID:24499489
"Exploration of microRNAs in porcine milk exosomes"
BMC Genomics. 15:100(2014).
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3 |
PMID:25230983
"The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing"
J Appl Genet. 56:239-252(2015).
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