miRBase entry: ssc-mir-489

Stem-loop ssc-mir-489


Accession
MI0022150
Description
Sus scrofa ssc-mir-489 precursor miRNA
Gene family
MIPF0000111; mir-489

Literature search
2 open access papers mention ssc-mir-489
(5 sentences)

Sequence

uggcagcuugguggucguauguguggcgccaucuacuugagcgguuaggAGUGACAUCACAUAUACGGCGGcuaaacugcu
.(((((.(((((.(((((((((((((.(.((.((.(((((....))))))))).).))))))))))))).))))).)))))

Structure
u     c     g             c c  u  a     g 
 ggcag uuggu gucguaugugugg g ca cu cuuga c
 ||||| ||||| ||||||||||||| | || || |||||  
 ucguc aaucG CGGCAUAUACACU C GU GA ggauu g
-     a     G             A A  -  -     g 


Annotation confidence Not enough data
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Genome context
chr9: 80161824-80161904 [-]

Database links

Mature ssc-miR-489

Accession MIMAT0025375
Description Sus scrofa ssc-miR-489 mature miRNA
Sequence 50 - AGUGACAUCACAUAUACGGCGG - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328