miRBase entry: ssc-mir-490-2

Stem-loop ssc-mir-490-2


Accession
MI0022151
Description
Sus scrofa ssc-mir-490-2 precursor miRNA
Gene family
MIPF0000229; mir-490

Literature search
2 open access papers mention ssc-mir-490-2
(2 sentences)

Sequence

6 reads, 10 reads per million, 5 experiments
cauuguucgacaccauggauccccaggugggucacguuucaagauacacCAACCUGGAGGACUCCAUGCUGuugagcuguu
....((((((((.(((((((((((((((.(((...((........))))).)))))).))).)))))).))))))))....

Structure
cauu        c      -   -      g   cac  uuc 
    guucgaca caugga ucc ccaggu ggu   gu   a
    |||||||| |||||| ||| |||||| |||   ||    
    cgaguuGU GUACCU AGG GGUCCA Cca   ca   a
uugu        C      C   A      A   ---  uag 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssc-miR-490

Accession MIMAT0025376
Description Sus scrofa ssc-miR-490 mature miRNA
Sequence 50 - CAACCUGGAGGACUCCAUGCUG - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328