Stem-loop sequence ssc-mir-3613

Accession

MI0022161 (change log)

Description

Sus scrofa miR-3613 stem-loop

Gene family

MIPF0001411; mir-3613

Literature search

2 open access papers mention ssc-mir-3613
(2 sentences)

Stem-loop

   g   u    uu    ua               g ugc 
5'  ggu ugga  guug  cuuuuuuuuuuguuc u   a
    ||| ||||  ||||  ||||||||||||||| |   u
3'  cca acuu  caac  gaaaaaaaaaacaag a   u
   g   c    cc    cc               g uuu 

Deep sequencing

2375 reads, 307 reads per million, 15 experiments

Confidence

Annotation confidence: not enough data

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Database links

• miRBase Tracker:MI0022161

Mature sequence ssc-miR-3613

• Accession: MIMAT0025387
• Sequence: 11 - uguuguacuuuuuuuuuugu - 30
• Deep sequencing: 2352 reads, 15 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:21312241 "MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing" Li G, Li Y, Li X, Ning X, Li M, Yang G J Cell Biochem. 112:1318-1328(2011).