miRBase entry: tgu-mir-499

Stem-loop tgu-mir-499


Accession
MI0022173
Description
Taeniopygia guttata tgu-mir-499 precursor miRNA
Gene family
MIPF0000173; mir-499

Literature search
1 open access papers mention tgu-mir-499
(1 sentences)

Sequence

agagagcggcagUUAAGACUUGUAGUGAUGUUUAgauaauuaauuacaugAACAUCACUUUAAGUCUGUGCUacuucu
...(((.((((....(((((((.(((((((((((..(((....)))..))))))))))).))))))).)))).)))..

Structure
aga   c    gUUA       U           ga   u 
   gag ggca    AGACUUG AGUGAUGUUUA  uaa u
   ||| ||||    ||||||| |||||||||||  |||  
   uuc UCGU    UCUGAAU UCACUACAAgu  auu a
-uc   a    ---G       U           ac   a 


Annotation confidence Not enough data
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Genome context
chr20: 3206374-3206451 [-]

Database links

Mature tgu-miR-499-5p

Accession MIMAT0025396
Description Taeniopygia guttata tgu-miR-499-5p mature miRNA
Sequence 13 - UUAAGACUUGUAGUGAUGUUUA - 34
Evidence experimental
Illumina [2]

Mature tgu-miR-499-3p

Accession MIMAT0027340
Description Taeniopygia guttata tgu-miR-499-3p mature miRNA
Sequence 51 - AACAUCACUUUAAGUCUGUGCU - 72
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27

  2. PubMed ID: 23268654
    Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression
    Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X
    BMC Genomics (2012) 13:727