Stem-loop pol-mir-1

Accession

MI0022189

Description

Paralichthys olivaceus pol-mir-1 precursor miRNA

Gene family

MIPF0000038; mir-1

Literature search

3 open access papers mention pol-mir-1
(8 sentences)

Sequence

ACAUACUUCUUUAUAUGCCCAUAugaacaagagcaacuaUGGAAUGUAAAGAAGUAUGUAU
((((((((((((((((..(((((((........))..))))).))))))))))))))))..

Structure

--                GC     --  aac 
  ACAUACUUCUUUAUAU  CCAUA  ug   a
  ||||||||||||||||  |||||  ||    
  UGUAUGAAGAAAUGUA  GGUau  ac   a
UA                -A     ca  gag 

Annotation confidence Not enough data

Genome context

Unknown

Mature pol-miR-1-5p

• Accession: MIMAT0025412
• Description: Paralichthys olivaceus pol-miR-1-5p mature miRNA
• Sequence: 1 - ACAUACUUCUUUAUAUGCCCAUA - 23
• Evidence: experimental ; Illumina [1]

Mature pol-miR-1-3p

• Accession: MIMAT0025413
• Description: Paralichthys olivaceus pol-miR-1-3p mature miRNA
• Sequence: 40 - UGGAAUGUAAAGAAGUAUGUAU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21818405
   Identification and differential expression of microRNAs during metamorphosis of the Japanese flounder (Paralichthys olivaceus)
   Fu Y, Shi Z, Wu M, Zhang J, Jia L, Chen X
   PLoS One (2011) 6:e22957