miRBase entry: pol-let-7a

Stem-loop pol-let-7a


Accession
MI0022191
Description
Paralichthys olivaceus pol-let-7a precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
2 open access papers mention pol-let-7a
(6 sentences)

Sequence

UGAGGUAGUAGGUUGUAUGGUUugugggauggaguaaauccuacucaggggauaaCUAUACAACCUACUGCCUUCC
.((((((((((((((((((((((.((((..(((.....)))..)))).)....)))))))))))))))))))))..

Structure
-U                     ---- g    au   g 
  GAGGUAGUAGGUUGUAUGGUU    u uggg  gga u
  |||||||||||||||||||||    | ||||  ||| a
  UUCCGUCAUCCAACAUAUCaa    g acuc  ccu a
CC                     uagg g    au   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pol-let-7a-5p

Accession MIMAT0025416
Description Paralichthys olivaceus pol-let-7a-5p mature miRNA
Sequence 1 - UGAGGUAGUAGGUUGUAUGGUU - 22
Evidence experimental
Illumina [1]

Mature pol-let-7a-3p

Accession MIMAT0025417
Description Paralichthys olivaceus pol-let-7a-3p mature miRNA
Sequence 56 - CUAUACAACCUACUGCCUUCC - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21818405
    Identification and differential expression of microRNAs during metamorphosis of the Japanese flounder (Paralichthys olivaceus)
    Fu Y, Shi Z, Wu M, Zhang J, Jia L, Chen X
    PLoS One (2011) 6:e22957