Stem-loop pol-mir-140

Accession

MI0022200

Description

Paralichthys olivaceus pol-mir-140 precursor miRNA

Gene family

MIPF0000085; mir-140

Literature search

2 open access papers mention pol-mir-140
(3 sentences)

Sequence

CAGUGGUUUUACCCUAUGGUAGgugacaucaugcuguucuACCACAGGGUAGAACCACGGAC
..(((((((((((((.((((((..((((......)))))))))).)))))))))))))....

Structure

--CA             A      gu    uc 
    GUGGUUUUACCCU UGGUAG  gaca  a
    ||||||||||||| ||||||  ||||   
    CACCAAGAUGGGA ACCAuc  uugu  u
CAGG             C      --    cg 

Annotation confidence Not enough data

Genome context

Unknown

Mature pol-miR-140-5p

• Accession: MIMAT0025434
• Description: Paralichthys olivaceus pol-miR-140-5p mature miRNA
• Sequence: 1 - CAGUGGUUUUACCCUAUGGUAG - 22
• Evidence: experimental ; Illumina [1]

Mature pol-miR-140-3p

• Accession: MIMAT0025435
• Description: Paralichthys olivaceus pol-miR-140-3p mature miRNA
• Sequence: 41 - ACCACAGGGUAGAACCACGGAC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21818405
   Identification and differential expression of microRNAs during metamorphosis of the Japanese flounder (Paralichthys olivaceus)
   Fu Y, Shi Z, Wu M, Zhang J, Jia L, Chen X
   PLoS One (2011) 6:e22957