miRBase entry: pol-mir-144

Stem-loop pol-mir-144


Accession
MI0022201
Description
Paralichthys olivaceus pol-mir-144 precursor miRNA
Gene family
MIPF0000093; mir-144


Sequence

gcggGGAUAUCAUCUUAUACUGUAAGUuuauuauagagacacUACAGUAUAGAUGAUGUACUAUcccg
.((((((((((((((.((((((((.((((.......))))..)))))))))))))))))....)))))

Structure
g     ----         U        -A    au 
 cggGG    AUAUCAUCU AUACUGUA  GUuu  u
 |||||    ||||||||| ||||||||  ||||  a
 gcccU    UGUAGUAGA UAUGACAU  caga  u
-     AUCA         -        ca    ga 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pol-miR-144-5p

Accession MIMAT0025436
Description Paralichthys olivaceus pol-miR-144-5p mature miRNA
Sequence 5 - GGAUAUCAUCUUAUACUGUAAGU - 27
Evidence experimental
Illumina [1]

Mature pol-miR-144-3p

Accession MIMAT0025437
Description Paralichthys olivaceus pol-miR-144-3p mature miRNA
Sequence 43 - UACAGUAUAGAUGAUGUACUAU - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21818405
    Identification and differential expression of microRNAs during metamorphosis of the Japanese flounder (Paralichthys olivaceus)
    Fu Y, Shi Z, Wu M, Zhang J, Jia L, Chen X
    PLoS One (2011) 6:e22957