Stem-loop hsa-mir-6500

Accession

MI0022211

Symbol

HGNC: MIR6500

Description

Homo sapiens hsa-mir-6500 precursor miRNA

Gene family

MIPF0001548; mir-4421

Literature search

1 open access papers mention hsa-mir-6500
(2 sentences)

Sequence

382 reads, 1336 reads per million, 45 experiments

ccugccugcagaaAGGAGCUAUCCACUCCAGGUGUCCuuucuucugagagcuggACACUUGUUGGGAUGACCUGCcugcagguagg
(((((((((((..(((...(((((.(..(((((((((.((((....))))..)))))))))..)))))).)))..)))))))))))

Structure

           aa   AGC     A UC         -u    u 
ccugccugcag  AGG   UAUCC C  CAGGUGUCC  uucu c
|||||||||||  |||   ||||| |  |||||||||  ||||  
ggauggacguc  UCC   GUAGG G  GUUCACAgg  gaga u
           CG   --A     - UU         uc    g 

Annotation confidence Not enough data

Genome context

chr1: 51060018-51060103 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from hsa-mir-6500

Disease association

hsa-mir-6500 is associated with one or more human diseases in the Human microRNA Disease Database

Mature hsa-miR-6500-5p

• Accession: MIMAT0025454
• Description: Homo sapiens hsa-miR-6500-5p mature miRNA
• Sequence: 14 - AGGAGCUAUCCACUCCAGGUGUCC - 37
• Evidence: experimental ; Illumina [1]

Mature hsa-miR-6500-3p

• Accession: MIMAT0025455
• Description: Homo sapiens hsa-miR-6500-3p mature miRNA
• Sequence: 55 - ACACUUGUUGGGAUGACCUGC - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21807764
   Deep sequencing of small RNAs from human skin reveals major alterations in the psoriasis miRNAome
   "Joyce CE, Zhou X, Xia J, Ryan C, Thrash B, Menter A, Zhang W, Bowcock AM"
   "Hum Mol Genet (2011) 20:4025-4040