Stem-loop han-MIR156b

Accession

MI0022229

Description

Helianthus annuus han-MIR156b precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

1 open access papers mention han-MIR156b
(3 sentences)

Sequence

aaagagaaguuugguugagaacUGACAGAAGAGAGUGAGCACaggccggcaacuguauacggagauuauacucuuguuggaauuaugcgugugcucacuucucuuucugucaggguccuauucuuucuuucguguugauuuuuuu
(((((((.(..(((..((...((((((((((((((((((((((.((((((((..(((((.......)))))..)))))).......)).))))))))).)))).)))))))))..)))))..))))))))...............

Structure

---------------       a uu   uu  gaa         -    -         g  -------      cu     cg 
               aaagaga g  ugg  ga   cUGACAGAA GAGA GUGAGCACa gc       cggcaa  guaua  g
               ||||||| |  |||  ||   ||||||||| |||| ||||||||| ||       ||||||  |||||  a
               uuucuuu c  auc  cu   gacugucuu cucu cacucgugu cg       guuguu  cauau  g
uuuuuuuaguugugc       - uu   --  -gg         u    u         g  uauuaag      cu     ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature han-miR156b

• Accession: MIMAT0025489
• Description: Helianthus annuus han-miR156b mature miRNA
• Sequence: 23 - UGACAGAAGAGAGUGAGCAC - 42
• Evidence: not_experimental

References

1. PubMed ID: 21670966
   Identification of MicroRNAs and their targets in Helianthus
   "Barozai MY, Baloch IA, Din M"
   "Mol Biol Rep (2012) 39:2523-2532