Stem-loop hci-MIR156b

Accession

MI0022231

Description

Helianthus ciliaris hci-MIR156b precursor miRNA

Gene family

MIPF0000008; MIR156

Sequence

ugaaguacuaggauaggaagUGACAGAAGAGAGGGAGCACagauuccuuuauuuaggcuuuccaucuaguuuaaguuggauucucuuggauaauccuuuggcugugcacacaaacaaguuccuucuugaacuccagggaguuguucuuccuucgccuuucauuguggcccgcuaaacgccuccuacaacuucuuuu
.(((((..((((((((...((.((((..((((((((((((((......(((((((((...((((.((......)).))))....)))))))))........)))))).........(((((......)))))..((((((.....)))))))).)))))).)))).))...)))......)))))..)))))....

Structure

---u     ac     ------   gaa  G    AA      -  --------------------------------------------      --auuccu         -cuu    u  ag 
    gaagu  uagga      uag   gU ACAG  GAGAGG GA                                            GCACag        uuauuuagg    ucca cu  u
    |||||  |||||      |||   || ||||  |||||| ||                                            ||||||        |||||||||    |||| ||   
    cuuca  auccu      auc   cg uguu  cuuucc cu                                            cguguc        aauagguuc    aggu ga  u
uuuu     ac     ccgcaa   gcc  g    -a      g  uccuucuuguugagggaccucaaguucuuccuugaacaaacaca      gguuuccu         ucuu    u  au 

Annotation confidence Not enough data

Genome context

Unknown

Mature hci-miR156b

• Accession: MIMAT0025491
• Description: Helianthus ciliaris hci-miR156b mature miRNA
• Sequence: 21 - UGACAGAAGAGAGGGAGCAC - 40
• Evidence: not_experimental

References

1. PubMed ID: 21670966
   Identification of MicroRNAs and their targets in Helianthus
   "Barozai MY, Baloch IA, Din M"
   "Mol Biol Rep (2012) 39:2523-2532