Stem-loop hpe-MIR162a

Accession

MI0022241

Description

Helianthus petiolaris hpe-MIR162a precursor miRNA

Gene family

MIPF0000127; MIR162_1

Sequence

ucauuuguguuccguagaggaucacuggauucagcgguucaucgaucuguuccauaauccuaaugauuaaauguucauacgacgauugagagaggugggaaauggaaucgaUCGAUAAACCUCUGCAUCCAGuguucuuccugcuuagcacgaucuuguuugugauuc
....(((((((..((((((((.((((((((.(((.((((.(((((((.(((((((..(((((....((((.((((.....)))).))))......))))).))))))).))))))).)))).))).)))))))).)))).))))..)))))))...............

Structure

-----------ucau       cc    -    u        u   c    c       u       aa     --auga    a    c 
               uuguguu  guag agga cacuggau cag gguu aucgauc guuccau  uccua      uuaa uguu a
               |||||||  |||| |||| |||||||| ||| |||| ||||||| |||||||  |||||      |||| |||| u
               agcacga  cguc uucu guGACCUA GUC CCAA UAGCUag uaaggua  agggu      aguu gcag a
cuuaguguuuguucu       uu    c    u        C   U    A       c       -a     ggagag    a    c 

Annotation confidence Not enough data

Genome context

Unknown

Mature hpe-miR162a

• Accession: MIMAT0025501
• Description: Helianthus petiolaris hpe-miR162a mature miRNA
• Sequence: 112 - UCGAUAAACCUCUGCAUCCAG - 132
• Evidence: not_experimental

References

1. PubMed ID: 21670966
   Identification of MicroRNAs and their targets in Helianthus
   "Barozai MY, Baloch IA, Din M"
   "Mol Biol Rep (2012) 39:2523-2532