Stem-loop hci-MIR164a

Accession

MI0022242

Description

Helianthus ciliaris hci-MIR164a precursor miRNA

Sequence

guugaggaaauuauugaucauguuuuuuugaguugucuggaauucgaccgaauUGGAGAAGCAGGGCACGUGAAucgaauuggauagguuuggaaugaucuugggugacuccaaugguggcagagaaguagcaaccccacccgaauccguccucguuagc
...(((((.....(((.(((........)))((((.(((...(((..(((.(((((((..((.(((..(((...(((((((.....))))))).)))..)))..))..)))))))..)))..)))...)))))))......))).....)))))......

Structure

---guu     aauua   aucauguuuuuuuga    u   gaa   ga   -a       AA  -A   CA   GAA       g 
      gagga     uug               guug cug   uuc  ccg  auUGGAG  GC  GGG  CGU   ucgaauu g
      |||||     |||               |||| |||   |||  |||  |||||||  ||  |||  |||   ||||||| a
      cuccu     agc               caac gau   gag  ggu  uaaccuc  ug  uuc  gua   gguuugg u
cgauug     gccua   ---------ccaccc    -   gaa   ac   gg       ag  gg   ua   --a       a 

Annotation confidence Not enough data

Genome context

Unknown

Mature hci-miR164a

• Accession: MIMAT0025502
• Description: Helianthus ciliaris hci-miR164a mature miRNA
• Sequence: 54 - UGGAGAAGCAGGGCACGUGAA - 74
• Evidence: not_experimental

References

1. PubMed ID: 21670966
   Identification of MicroRNAs and their targets in Helianthus
   "Barozai MY, Baloch IA, Din M"
   "Mol Biol Rep (2012) 39:2523-2532