Stem-loop hpa-MIR166a

Accession

MI0022243

Description

Helianthus paradoxus hpa-MIR166a precursor miRNA

Gene family

MIPF0000004; MIR166

Sequence

uuuguggggaauguugucuggcucgagaccacaagaaagcuucaaucuuuaugaucuuuauguuacauaaucacauaauugaucaaucuuuguugaucaaugauuaaagauucuaaucuuguguugUCGGACCAGGCUUCAUUCCCCucaug
..((.((((((((..((((((.((((.(.(((((((.((....((((((..(((((..(((((.........)))))((((((((((....)))))))))))))))))))))))..))))))).).)))).))))))..)))))))).))..

Structure

uu  u        uu      c    g c       -a  cuuc      ua     uuuauguuacauaaucacaua          c 
  ug ggggaaug  gucugg ucga a cacaaga  ag    aaucuu  ugauc                     auugaucaau u
  || ||||||||  |||||| |||| | |||||||  ||    ||||||  |||||                     ||||||||||  
  ac CCCCUUAC  CGGACC GGCU u guguucu  uc    uuagaa  auuag                     uaacuaguug u
gu  u        UU      A    g u       aa  ----      --     ---------------------          u 

Annotation confidence Not enough data

Genome context

Unknown

Mature hpa-miR166a

• Accession: MIMAT0025503
• Description: Helianthus paradoxus hpa-miR166a mature miRNA
• Sequence: 127 - UCGGACCAGGCUUCAUUCCCC - 147
• Evidence: not_experimental

References

1. PubMed ID: 21670966
   Identification of MicroRNAs and their targets in Helianthus
   "Barozai MY, Baloch IA, Din M"
   "Mol Biol Rep (2012) 39:2523-2532