Stem-loop hpe-MIR166a

Accession

MI0022244

Description

Helianthus petiolaris hpe-MIR166a precursor miRNA

Gene family

MIPF0000004; MIR166

Sequence

gguagaucuuucuuuuguggggaauguugucuggcucgagaccacaagaaagcuucaaucuuuauaaucuuuauguuacauaaucacauaauugaucaaucuuuguugaucaaugauuaaagauuagaaucuuguguugUCGGACCAGGCUUCAUUCCCCucauguguucuuccuu
((.(((.(.......((.((((((((..((((((.((((.(.(((((((....(((((((((((..(((..(((((.........)))))((((((((((....))))))))))))))))))))).)))))))))).).)))).))))))..)))))))).))...).))).))..

Structure

--  u   u uuucuuu  u        uu      c    g c       aagc   -        ua   uuuauguuacauaaucacaua          c 
  gg aga c       ug ggggaaug  gucugg ucga a cacaaga    uuc aaucuuua  auc                     auugaucaau u
  || ||| |       || ||||||||  |||||| |||| | |||||||    ||| ||||||||  |||                     ||||||||||  
  cc ucu g       ac CCCCUUAC  CGGACC GGCU u guguucu    aag uuagaaau  uag                     uaacuaguug u
uu  u   u ----ugu  u        UU      A    g u       ----   a        --   ---------------------          u 

Annotation confidence Not enough data

Genome context

Unknown

Mature hpe-miR166a

• Accession: MIMAT0025504
• Description: Helianthus petiolaris hpe-miR166a mature miRNA
• Sequence: 140 - UCGGACCAGGCUUCAUUCCCC - 160
• Evidence: not_experimental

References

1. PubMed ID: 21670966
   Identification of MicroRNAs and their targets in Helianthus
   "Barozai MY, Baloch IA, Din M"
   "Mol Biol Rep (2012) 39:2523-2532