Stem-loop htu-MIR393b

Accession

MI0022252

Description

Helianthus tuberosus htu-MIR393b precursor miRNA

Gene family

MIPF0000083; MIR393

Sequence

gguugaagcuUCCAAAGGGAUCGCAUUGAUCCaucuguccacucggauuucaaucucaguugauaauuuggaucaugcgaucucuucggaagcuuccuccaucgc
((..(((((((((.((((((((((((.((((((..((((.(((.((((....)))).))).))))...)))))))))))))))))).)))))))))..)).....

Structure

-----  uu         A            U      -uc    c   c    u 
     gg  gaagcuUCC AAGGGAUCGCAU GAUCCa   uguc acu ggau u
     ||  ||||||||| |||||||||||| ||||||   |||| ||| ||||  
     cc  cuucgaagg uucucuagcgua cuaggu   auag uga ucua c
cgcua  uc         c            -      uua    u   c    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature htu-miR393b

• Accession: MIMAT0025512
• Description: Helianthus tuberosus htu-miR393b mature miRNA
• Sequence: 11 - UCCAAAGGGAUCGCAUUGAUCC - 32
• Evidence: not_experimental

References

1. PubMed ID: 21670966
   Identification of MicroRNAs and their targets in Helianthus
   "Barozai MY, Baloch IA, Din M"
   "Mol Biol Rep (2012) 39:2523-2532