Stem-loop htu-MIR393c

Accession

MI0022253

Description

Helianthus tuberosus htu-MIR393c precursor miRNA

Gene family

MIPF0000083; MIR393

Sequence

agcggguugaaguuUCCAAAGGGAUCGCAUUGAUCCaucuguccacucggauuucaaucucaguugauaauuuggaucaugcgaucucuucggaagcuucc
........(((((((((.((((((((((((.((((((..((((.(((.((((....)))).))).))))...)))))))))))))))))).))))))))).

Structure

agcggguu         A            U      -uc    c   c    u 
        gaaguuUCC AAGGGAUCGCAU GAUCCa   uguc acu ggau u
        ||||||||| |||||||||||| ||||||   |||| ||| ||||  
        cuucgaagg uucucuagcgua cuaggu   auag uga ucua c
-------c         c            -      uua    u   c    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature htu-miR393c

• Accession: MIMAT0025513
• Description: Helianthus tuberosus htu-miR393c mature miRNA
• Sequence: 15 - UCCAAAGGGAUCGCAUUGAUCC - 36
• Evidence: not_experimental

References

1. PubMed ID: 21670966
   Identification of MicroRNAs and their targets in Helianthus
   "Barozai MY, Baloch IA, Din M"
   "Mol Biol Rep (2012) 39:2523-2532