miRBase entry: htu-MIR403c

Stem-loop htu-MIR403c


Accession
MI0022256
Description
Helianthus tuberosus htu-MIR403c precursor miRNA
Gene family
MIPF0000290; MIR403


Sequence

acagccauauuucguguuugugcgugaaucuaaggauccuuaaucuuaucacaucaccaguaaguaaucauacuuuuuucuuuguuuguuuguuaccagacagggucuguugguucgUUAGAUUCACGCACAAACUCGuaauaugucucuu
..((.((((((.((.((((((((((((((((((.((.((......................(((((....)))))....(((((((((........)))))))))......)).)).)))))))))))))))))).)).)))))).))...

Structure
-ac  c      u  u                  g  u  uuaaucuuaucacaucaccaguaaguaaucauacuuuuuu         uuu 
   ag cauauu cg guuugugcgugaaucuaa ga cc                                        cuuuguuug   g
   || |||||| || |||||||||||||||||| || ||                                        |||||||||    
   uc guauaa GC CAAACACGCACUUAGAUU cu gg                                        gggacagac   u
uuc  u      u  U                  g  u  ----------------------------------uugucu         cau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature htu-miR403c

Accession MIMAT0025516
Description Helianthus tuberosus htu-miR403c mature miRNA
Sequence 118 - UUAGAUUCACGCACAAACUCG - 138
Evidence not_experimental

References

  1. PubMed ID: 21670966
    Identification of MicroRNAs and their targets in Helianthus
    "Barozai MY, Baloch IA, Din M"
    "Mol Biol Rep (2012) 39:2523-2532