Stem-loop htu-MIR403d

Accession

MI0022257

Description

Helianthus tuberosus htu-MIR403d precursor miRNA

Gene family

MIPF0000290; MIR403

Sequence

uucccuuccgaacagccauauuucguguuugugcgugaaucuaacgauccuuaaucuuaucacaucaccaguaaucauacuuuuuguuugucuguuuguugccagacaggaucuguugguucgUUAGAUUCACGCACAAACUCGuaauaugucucu
.............((.((((((.((.(((((((((((((((((((((.((...((((............((((....)))).......((((((........)))))))))).....)).))))))))))))))))))))).)).)))))).))..

Structure

uucccuuccgaac  c      u  u                     u  --uua    uaucacaucaccaguaaucauacuuuuuguu      uuu 
             ag cauauu cg guuugugcgugaaucuaacga cc     aucu                               ugucug   g
             || |||||| || ||||||||||||||||||||| ||     ||||                               ||||||    
             uc guauaa GC CAAACACGCACUUAGAUUgcu gg     uagg                               acagac   u
-----------uc  u      u  U                     u  uuguc    -------------------------------      cgu 

Annotation confidence Not enough data

Genome context

Unknown

Mature htu-miR403d

• Accession: MIMAT0025517
• Description: Helianthus tuberosus htu-miR403d mature miRNA
• Sequence: 124 - UUAGAUUCACGCACAAACUCG - 144
• Evidence: not_experimental

References

1. PubMed ID: 21670966
   Identification of MicroRNAs and their targets in Helianthus
   "Barozai MY, Baloch IA, Din M"
   "Mol Biol Rep (2012) 39:2523-2532