Stem-loop hpe-MIR403a

Accession

MI0022260

Description

Helianthus petiolaris hpe-MIR403a precursor miRNA

Gene family

MIPF0000290; MIR403

Sequence

uucucuuccgaacagccauauuucguguuugugcgugaaucuaaggauccuuaaucuuaucacaucaccaguaaucauacuuuuuguuugucuguugccagucaggaucuguugguucgUUAGAUUCACGCACAAACUCGuaauaugucucuu
.............((.((((((.((.((((((((((((((((((.((.((...(((((..(....((.((((((.((.......)).))).))).))...)..))))).....)).)).)))))))))))))))))).)).)))))).))...

Structure

uucucuuccgaac  c      u  u                  g  u  --uua     au acau  c   -   u  ua 
             ag cauauu cg guuugugcgugaaucuaa ga cc     aucuu  c    ca cag uaa ca  c
             || |||||| || |||||||||||||||||| || ||     |||||  |    || ||| ||| ||  u
             uc guauaa GC CAAACACGCACUUAGAUU cu gg     uagga  g    gu guc guu gu  u
----------uuc  u      u  U                  g  u  uuguc     cu -acc  u   u   u  uu 

Annotation confidence Not enough data

Genome context

Unknown

Mature hpe-miR403a

• Accession: MIMAT0025520
• Description: Helianthus petiolaris hpe-miR403a mature miRNA
• Sequence: 120 - UUAGAUUCACGCACAAACUCG - 140
• Evidence: not_experimental

References

1. PubMed ID: 21670966
   Identification of MicroRNAs and their targets in Helianthus
   "Barozai MY, Baloch IA, Din M"
   "Mol Biol Rep (2012) 39:2523-2532