Stem-loop hhi-mir-147b

Accession

MI0022267

Description

Hippoglossus hippoglossus hhi-mir-147b precursor miRNA

Gene family

MIPF0000105; mir-147

Literature search

1 open access papers mention hhi-mir-147b
(3 sentences)

Sequence

caucagucgaacagaauccuuucugcacaaacuaggaugcuuugucacucaGUGUGCGGAAACGCUUCUGCUCCacugguggg
(((((((.((.(((((.(.((((((((((....(((((.....))).))...)))))))))).).))))).)).)))))))..

Structure

--       c  a     u c          aacu  -   g 
  caucagu ga cagaa c uuucugcaca    ag gau c
  ||||||| || ||||| | ||||||||||    || ||| u
  gugguca CU GUCUU G AAAGGCGUGU    uc cug u
gg       C  C     C C          -Gac  a   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature hhi-miR-147b

• Accession: MIMAT0025527
• Description: Hippoglossus hippoglossus hhi-miR-147b mature miRNA
• Sequence: 52 - GUGUGCGGAAACGCUUCUGCUCC - 74
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 22233483
   Differential expression patterns of conserved miRNAs and isomiRs during Atlantic halibut development
   Bizuayehu TT, Lanes CF, Furmanek T, Karlsen BO, Fernandes JM, Johansen SD, Babiak I
   BMC Genomics (2012) 13:11